STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rad51dRAD51 paralog D. (333 aa)    
Predicted Functional Partners:
XRCC2
X-ray repair cross complementing 2.
   
 0.990
brca2
BRCA2 DNA repair associated.
   
 0.985
xrcc3
DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions; Belongs to the RecA family. RAD51 subfamily.
    
0.980
LOC101472995
RAD51 paralog C.
   
0.980
fancm
Uncharacterized protein.
   
 0.978
blm
BLM RecQ like helicase.
  
 0.960
rad52
RAD52 homolog, DNA repair protein.
    
 0.957
fbh1
F-box DNA helicase 1.
  
 
 0.949
mus81
MUS81 structure-specific endonuclease subunit.
   
 0.947
exo1
Exonuclease 1.
  
 0.944
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.