STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcp4Uncharacterized protein. (60 aa)    
Predicted Functional Partners:
CALML6
Calmodulin like 6.
    
 
 0.699
LOC101478422
Parvalbumin 6; Belongs to the parvalbumin family.
    
 
 0.478
cep76
Centrosomal protein 76.
      
 0.441
garnl3
GTPase activating Rap/RanGAP domain like 3.
      
 0.437
LOC101486743
WH1 domain-containing protein.
      
 0.420
homer3
Homer scaffold protein 3b.
      
 0.420
irx2
Iroquois homeobox 2a.
      
 0.412
lxn
Latexin.
      
 0.410
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.