STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101471515Complement 4B (Chido blood group). (1632 aa)    
Predicted Functional Partners:
cfi
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.766
cd55
Uncharacterized protein.
   
 0.739
LOC101480328
Si:ch1073-280e3.1; Belongs to the peptidase S1 family.
   
 0.657
LOC101486732
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.657
LOC101476252
Uncharacterized protein.
   
 0.624
c5
Uncharacterized protein.
   
0.569
rnf2
Ring finger protein 2.
    
 0.558
RING1
Ring finger protein 1.
    
 0.558
pcgf2
Polycomb group ring finger 2.
    
 0.554
bmi1
Bmi1 polycomb ring finger oncogene 1a.
    
 0.554
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.