STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grm1Glutamate receptor, metabotropic 1a. (1169 aa)    
Predicted Functional Partners:
LOC101486274
Homer scaffold protein 1b.
    
 0.968
LOC101486743
WH1 domain-containing protein.
    
 0.956
homer3
Homer scaffold protein 3b.
    
 0.956
LOC101482854
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
 0.926
LOC101475922
Uncharacterized protein.
    
 0.926
homer2
Homer scaffold protein 2.
    
  0.914
LOC101467938
Glutamate receptor, metabotropic 1b.
  
  
 
0.905
agap2
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2.
   
  0.903
LOC112429710
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.743
GNA14
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.743
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.