Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EME2 | ENSMZEP00005035748 | ENSMZEP00005015567 | ENSMZEP00005035748 | ERCC4 domain-containing protein. | RecQ helicase-like 4. | 0.427 |
EME2 | blm | ENSMZEP00005015567 | ENSMZEP00005029946 | ERCC4 domain-containing protein. | BLM RecQ like helicase. | 0.487 |
EME2 | eme1 | ENSMZEP00005015567 | ENSMZEP00005004373 | ERCC4 domain-containing protein. | Essential meiotic structure-specific endonuclease 1. | 0.797 |
EME2 | ercc1 | ENSMZEP00005015567 | ENSMZEP00005012840 | ERCC4 domain-containing protein. | Excision repair cross-complementation group 1. | 0.457 |
EME2 | ercc4 | ENSMZEP00005015567 | ENSMZEP00005009673 | ERCC4 domain-containing protein. | Excision repair cross-complementation group 4. | 0.718 |
EME2 | fancm | ENSMZEP00005015567 | ENSMZEP00005006038 | ERCC4 domain-containing protein. | Uncharacterized protein. | 0.631 |
EME2 | mus81 | ENSMZEP00005015567 | ENSMZEP00005026575 | ERCC4 domain-containing protein. | MUS81 structure-specific endonuclease subunit. | 0.991 |
EME2 | nars1 | ENSMZEP00005015567 | ENSMZEP00005031635 | ERCC4 domain-containing protein. | Asparaginyl-tRNA synthetase. | 0.475 |
EME2 | rad51 | ENSMZEP00005015567 | ENSMZEP00005016729 | ERCC4 domain-containing protein. | DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] | 0.498 |
EME2 | slx4 | ENSMZEP00005015567 | ENSMZEP00005004897 | ERCC4 domain-containing protein. | SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae). | 0.606 |
ENSMZEP00005035748 | EME2 | ENSMZEP00005035748 | ENSMZEP00005015567 | RecQ helicase-like 4. | ERCC4 domain-containing protein. | 0.427 |
ENSMZEP00005035748 | eme1 | ENSMZEP00005035748 | ENSMZEP00005004373 | RecQ helicase-like 4. | Essential meiotic structure-specific endonuclease 1. | 0.671 |
ENSMZEP00005035748 | ercc1 | ENSMZEP00005035748 | ENSMZEP00005012840 | RecQ helicase-like 4. | Excision repair cross-complementation group 1. | 0.611 |
ENSMZEP00005035748 | ercc4 | ENSMZEP00005035748 | ENSMZEP00005009673 | RecQ helicase-like 4. | Excision repair cross-complementation group 4. | 0.921 |
ENSMZEP00005035748 | fancm | ENSMZEP00005035748 | ENSMZEP00005006038 | RecQ helicase-like 4. | Uncharacterized protein. | 0.999 |
ENSMZEP00005035748 | mus81 | ENSMZEP00005035748 | ENSMZEP00005026575 | RecQ helicase-like 4. | MUS81 structure-specific endonuclease subunit. | 0.966 |
ENSMZEP00005035748 | nars1 | ENSMZEP00005035748 | ENSMZEP00005031635 | RecQ helicase-like 4. | Asparaginyl-tRNA synthetase. | 0.653 |
ENSMZEP00005035748 | rad51 | ENSMZEP00005035748 | ENSMZEP00005016729 | RecQ helicase-like 4. | DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] | 0.979 |
ENSMZEP00005035748 | slx4 | ENSMZEP00005035748 | ENSMZEP00005004897 | RecQ helicase-like 4. | SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae). | 0.653 |
blm | EME2 | ENSMZEP00005029946 | ENSMZEP00005015567 | BLM RecQ like helicase. | ERCC4 domain-containing protein. | 0.487 |
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