STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cops5COP9 signalosome subunit 5. (334 aa)    
Predicted Functional Partners:
cops4
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).
   
 0.993
COPS6
COP9 signalosome subunit 6.
   
 0.991
cops2
COP9 signalosome subunit 2.
   
 0.991
cops8
COP9 signalosome subunit 8.
   
 0.991
cops3
COP9 signalosome subunit 3.
   
 0.989
gps1
G protein pathway suppressor 1.
   
 0.988
cops7a
COP9 constitutive photomorphogenic homolog subunit 7A.
    
 0.982
psmd12
Proteasome 26S subunit, non-ATPase 12.
   
 0.957
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
   
 0.956
cul1
Cullin 1b; Belongs to the cullin family.
   
 0.944
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.