STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMZEP00005033874Uncharacterized protein. (101 aa)    
Predicted Functional Partners:
ascc2
Activating signal cointegrator 1 complex subunit 2.
    
 0.966
prpf8
Pre-mRNA processing factor 8.
   
 0.957
trip4
Thyroid hormone receptor interactor 4.
    
 
 0.927
Snrpf
Small nuclear ribonucleoprotein polypeptide F.
   
 0.896
snrpd3
Small nuclear ribonucleoprotein Sm D3.
   
 0.891
snrpd2
Small nuclear ribonucleoprotein Sm D2.
   
 0.888
snrpe
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.882
ascc1
Activating signal cointegrator 1 complex subunit 1.
    
 0.873
snrpg
Small nuclear ribonucleoprotein G.
   
  0.872
Sart1
Uncharacterized protein.
   
 0.860
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.