STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101466041Sulfotransferase; Belongs to the sulfotransferase 1 family. (458 aa)    
Predicted Functional Partners:
chst7
Sulfotransferase; Belongs to the sulfotransferase 1 family.
    
0.910
chst3
Sulfotransferase; Belongs to the sulfotransferase 1 family.
  
 
 
0.906
DSEL
Dermatan sulfate epimerase like a.
      
 0.573
lum
Lumican.
     
 0.564
LOC101467177
Keratocan.
     
 0.478
CHST15
Carbohydrate sulfotransferase 15.
      
 0.430
csgalnact2
Hexosyltransferase.
      
 0.424
fam167a
Family with sequence similarity 167 member Ab.
      
 0.416
fam20b
FAM20B glycosaminoglycan xylosylkinase.
      
 0.416
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.