STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMZEP00005037831PDZ domain-containing protein. (1265 aa)    
Predicted Functional Partners:
LOC101469546
Protein S100; Belongs to the S-100 family.
   
 0.676
MSL3
MSL complex subunit 3.
    
 0.633
LOC101478341
MSL complex subunit 2.
    
 0.508
MSL2
MSL complex subunit 2.
    
 0.508
ENSMZEP00005026889
Uncharacterized protein.
   
  0.460
LOC105940933
Im:7152348.
   
 0.442
egr2
Early growth response 2b.
    
 0.430
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.430
nxf1
Zgc:153681.
    
 0.413
LOC101477800
Annexin.
   
 0.411
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.