STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVD_01795Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)    
Predicted Functional Partners:
TVD_01800
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.842
TVD_01820
Pilus assembly protein PilP; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.783
TVD_01815
Pilus assembly protein PilO; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.732
TVD_01810
Pilus assembly protein PilN; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.724
TVD_01805
Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.714
TVD_11860
Glycine cleavage system protein R; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.670
TVD_01825
Pilus assembly protein PilQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.663
TVD_01620
HNH endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.631
TVD_04980
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.621
pfp
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.
  
 
 0.559
Your Current Organism:
Thioalkalivibrio versutus
NCBI taxonomy Id: 106634
Other names: CBS 100464, DSM 13738, T. versutus, Thialkalivibrio versutus, Thioalkalivibrio versutus Sorokin et al. 2001, strain AL 2
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