STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVD_10245GMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)    
Predicted Functional Partners:
guaB
Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
 0.963
TVD_10240
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.810
TVD_10235
Permase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.797
TVD_10250
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
       0.795
TVD_10520
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.774
TVD_10615
Sulfur reduction protein DsrE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.769
TVD_10630
Heterodisulfide reductase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.766
TVD_10645
Heterodisulfide reductase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.766
TVD_10650
Heterodisulfide reductase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.758
TVD_09575
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.737
Your Current Organism:
Thioalkalivibrio versutus
NCBI taxonomy Id: 106634
Other names: CBS 100464, DSM 13738, T. versutus, Thialkalivibrio versutus, Thioalkalivibrio versutus Sorokin et al. 2001, strain AL 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.