Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000753985_00004 | GCA_000753985_01106 | GCA_000753985_00004 | GCA_000753985_01106 | Unannotated protein. | Unannotated protein. | 0.538 |
GCA_000753985_00004 | GCA_000753985_01900 | GCA_000753985_00004 | GCA_000753985_01900 | Unannotated protein. | Unannotated protein. | 0.470 |
GCA_000753985_00004 | macB | GCA_000753985_00004 | GCA_000753985_01649 | Unannotated protein. | Unannotated protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.403 |
GCA_000753985_01106 | GCA_000753985_00004 | GCA_000753985_01106 | GCA_000753985_00004 | Unannotated protein. | Unannotated protein. | 0.538 |
GCA_000753985_01900 | GCA_000753985_00004 | GCA_000753985_01900 | GCA_000753985_00004 | Unannotated protein. | Unannotated protein. | 0.470 |
macB | GCA_000753985_00004 | GCA_000753985_01649 | GCA_000753985_00004 | Unannotated protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | Unannotated protein. | 0.403 |