Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EYB59_00560 | GCA_000753985_00151 | GCA_000753985_04160 | GCA_000753985_00151 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein. | 0.910 |
EYB59_00560 | GCA_000753985_00826 | GCA_000753985_04160 | GCA_000753985_00826 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.916 |
EYB59_00560 | GCA_000753985_01358 | GCA_000753985_04160 | GCA_000753985_01358 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.916 |
EYB59_00560 | GCA_000753985_01678 | GCA_000753985_04160 | GCA_000753985_01678 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein. | 0.910 |
EYB59_00560 | GCA_000753985_01828 | GCA_000753985_04160 | GCA_000753985_01828 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein; Belongs to the HIBADH-related family. | 0.913 |
EYB59_00560 | GCA_000753985_01829 | GCA_000753985_04160 | GCA_000753985_01829 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein. | 0.904 |
EYB59_00560 | GCA_000753985_03550 | GCA_000753985_04160 | GCA_000753985_03550 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein. | 0.900 |
EYB59_00560 | GCA_000753985_04158 | GCA_000753985_04160 | GCA_000753985_04158 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.967 |
EYB59_00560 | GCA_000753985_04358 | GCA_000753985_04160 | GCA_000753985_04358 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein. | 0.910 |
EYB59_00560 | GCA_000753985_04406 | GCA_000753985_04160 | GCA_000753985_04406 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein. | 0.900 |
GCA_000753985_00151 | EYB59_00560 | GCA_000753985_00151 | GCA_000753985_04160 | Unannotated protein. | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | 0.910 |
GCA_000753985_00151 | GCA_000753985_00826 | GCA_000753985_00151 | GCA_000753985_00826 | Unannotated protein. | Unannotated protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.921 |
GCA_000753985_00151 | GCA_000753985_01358 | GCA_000753985_00151 | GCA_000753985_01358 | Unannotated protein. | Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.921 |
GCA_000753985_00151 | GCA_000753985_01678 | GCA_000753985_00151 | GCA_000753985_01678 | Unannotated protein. | Unannotated protein. | 0.926 |
GCA_000753985_00151 | GCA_000753985_01828 | GCA_000753985_00151 | GCA_000753985_01828 | Unannotated protein. | Unannotated protein; Belongs to the HIBADH-related family. | 0.922 |
GCA_000753985_00151 | GCA_000753985_01829 | GCA_000753985_00151 | GCA_000753985_01829 | Unannotated protein. | Unannotated protein. | 0.924 |
GCA_000753985_00151 | GCA_000753985_03550 | GCA_000753985_00151 | GCA_000753985_03550 | Unannotated protein. | Unannotated protein. | 0.923 |
GCA_000753985_00151 | GCA_000753985_04158 | GCA_000753985_00151 | GCA_000753985_04158 | Unannotated protein. | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.900 |
GCA_000753985_00151 | GCA_000753985_04358 | GCA_000753985_00151 | GCA_000753985_04358 | Unannotated protein. | Unannotated protein. | 0.903 |
GCA_000753985_00151 | GCA_000753985_04406 | GCA_000753985_00151 | GCA_000753985_04406 | Unannotated protein. | Unannotated protein. | 0.923 |
page 1 of 6