STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000753985_01075Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (238 aa)    
Predicted Functional Partners:
GCA_000753985_01076
Unannotated protein.
       0.795
EYB59_14730
Unannotated protein.
  
 
   0.763
GCA_000753985_00468
Unannotated protein.
  
 
   0.759
GCA_000753985_04191
Unannotated protein.
  
 
   0.754
GCA_000753985_04211
Unannotated protein.
  
 
   0.749
GCA_000753985_00469
Unannotated protein.
  
 
   0.747
GCA_000753985_02875
Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.742
NDM229_008130
Unannotated protein.
  
 
   0.736
GCA_000753985_01049
Unannotated protein.
  
     0.706
GCA_000753985_03515
Unannotated protein.
  
 
   0.699
Your Current Organism:
Acinetobacter bereziniae
NCBI taxonomy Id: 106648
Other names: A. bereziniae, ATCC 17924, Acinetobacter bereziniae Nemec et al. 2010, Acinetobacter genomic species 10, Acinetobacter genomosp. 10, Acinetobacter genomospecies 10, Acinetobacter genospecies 10, Acinetobacter sp. TDB-2008a, CIP 70.12, DSM 25435, NIPH 521, strain 69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.