Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EYB59_15975 | NDM229_002915 | GCA_000753985_01668 | GCA_000753985_01671 | Unannotated protein. | Unannotated protein. | 0.834 |
EYB59_15975 | bamB | GCA_000753985_01668 | GCA_000753985_01672 | Unannotated protein. | Unannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.837 |
EYB59_15975 | der | GCA_000753985_01668 | GCA_000753985_01673 | Unannotated protein. | Unannotated protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.686 |
EYB59_15975 | hisS | GCA_000753985_01668 | GCA_000753985_01670 | Unannotated protein. | Unannotated protein. | 0.855 |
EYB59_15975 | ispG | GCA_000753985_01668 | GCA_000753985_01669 | Unannotated protein. | Unannotated protein; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. | 0.909 |
EYB59_15975 | ndk | GCA_000753985_01668 | GCA_000753985_01665 | Unannotated protein. | Unannotated protein; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.670 |
EYB59_15975 | pilW | GCA_000753985_01668 | GCA_000753985_01667 | Unannotated protein. | Unannotated protein. | 0.893 |
EYB59_15975 | rlmN | GCA_000753985_01668 | GCA_000753985_01666 | Unannotated protein. | Unannotated protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. | 0.794 |
NDM229_002915 | EYB59_15975 | GCA_000753985_01671 | GCA_000753985_01668 | Unannotated protein. | Unannotated protein. | 0.834 |
NDM229_002915 | bamB | GCA_000753985_01671 | GCA_000753985_01672 | Unannotated protein. | Unannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.971 |
NDM229_002915 | der | GCA_000753985_01671 | GCA_000753985_01673 | Unannotated protein. | Unannotated protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.801 |
NDM229_002915 | hisS | GCA_000753985_01671 | GCA_000753985_01670 | Unannotated protein. | Unannotated protein. | 0.951 |
NDM229_002915 | ispG | GCA_000753985_01671 | GCA_000753985_01669 | Unannotated protein. | Unannotated protein; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. | 0.849 |
NDM229_002915 | ndk | GCA_000753985_01671 | GCA_000753985_01665 | Unannotated protein. | Unannotated protein; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.659 |
NDM229_002915 | pilW | GCA_000753985_01671 | GCA_000753985_01667 | Unannotated protein. | Unannotated protein. | 0.839 |
NDM229_002915 | rlmN | GCA_000753985_01671 | GCA_000753985_01666 | Unannotated protein. | Unannotated protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. | 0.739 |
aspS | hisS | GCA_000753985_04142 | GCA_000753985_01670 | Unannotated protein; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Unannotated protein. | 0.864 |
bamB | EYB59_15975 | GCA_000753985_01672 | GCA_000753985_01668 | Unannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Unannotated protein. | 0.837 |
bamB | NDM229_002915 | GCA_000753985_01672 | GCA_000753985_01671 | Unannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Unannotated protein. | 0.971 |
bamB | der | GCA_000753985_01672 | GCA_000753985_01673 | Unannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Unannotated protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.774 |
page 1 of 4