STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000753985_03112Unannotated protein. (500 aa)    
Predicted Functional Partners:
EYB59_07885
Unannotated protein.
 
 
 0.723
EYB59_07660
Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.642
GCA_000753985_03113
Unannotated protein.
 
     0.612
GCA_000753985_03111
Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.565
EYB59_07655
Unannotated protein.
  
     0.557
GCA_000753985_00423
Unannotated protein.
  
     0.556
NDM229_006010
Unannotated protein.
 
     0.551
NDM229_013565
Unannotated protein.
 
     0.542
EYB59_13860
Unannotated protein.
  
 0.532
EYB59_16845
Unannotated protein.
 
     0.532
Your Current Organism:
Acinetobacter bereziniae
NCBI taxonomy Id: 106648
Other names: A. bereziniae, ATCC 17924, Acinetobacter bereziniae Nemec et al. 2010, Acinetobacter genomic species 10, Acinetobacter genomosp. 10, Acinetobacter genomospecies 10, Acinetobacter genospecies 10, Acinetobacter sp. TDB-2008a, CIP 70.12, DSM 25435, NIPH 521, strain 69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.