STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000753985_03147Unannotated protein. (475 aa)    
Predicted Functional Partners:
EYB59_13995
Unannotated protein; Belongs to the asparaginase 1 family.
 
 
 0.944
GCA_000753985_03647
Unannotated protein.
  
 
 0.937
GCA_000753985_04555
Unannotated protein; Catalyzes the oxidation of L-aspartate to iminoaspartate.
   
 0.910
argH
Unannotated protein.
     
 0.907
EYB59_05230
Unannotated protein.
    
 0.906
GCA_000753985_03948
Unannotated protein.
    
 0.906
GCA_000753985_02345
Unannotated protein.
    
 0.905
purA
Unannotated protein; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
 0.905
GCA_000753985_03481
Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
 0.905
GCA_000753985_00713
Unannotated protein.
  
  
 
0.904
Your Current Organism:
Acinetobacter bereziniae
NCBI taxonomy Id: 106648
Other names: A. bereziniae, ATCC 17924, Acinetobacter bereziniae Nemec et al. 2010, Acinetobacter genomic species 10, Acinetobacter genomosp. 10, Acinetobacter genomospecies 10, Acinetobacter genospecies 10, Acinetobacter sp. TDB-2008a, CIP 70.12, DSM 25435, NIPH 521, strain 69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.