STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000753985_03336Unannotated protein. (546 aa)    
Predicted Functional Partners:
GCA_000753985_03337
Unannotated protein.
 
     0.816
GCA_000753985_03335
Unannotated protein.
 
   
 0.815
GCA_000753985_03332
Unannotated protein; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family.
 
     0.680
GCA_000753985_03334
Unannotated protein; Belongs to the aldehyde dehydrogenase family.
  
  
 0.642
EYB59_02870
Unannotated protein.
  
    0.612
GCA_000753985_03338
Unannotated protein.
       0.605
betI
Unannotated protein; Repressor involved in choline regulation of the bet genes.
 
  
 0.583
ppc-2
Unannotated protein; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.
       0.529
GCA_000753985_01276
Unannotated protein.
    
 0.490
GCA_000753985_01395
Unannotated protein.
    
 0.490
Your Current Organism:
Acinetobacter bereziniae
NCBI taxonomy Id: 106648
Other names: A. bereziniae, ATCC 17924, Acinetobacter bereziniae Nemec et al. 2010, Acinetobacter genomic species 10, Acinetobacter genomosp. 10, Acinetobacter genomospecies 10, Acinetobacter genospecies 10, Acinetobacter sp. TDB-2008a, CIP 70.12, DSM 25435, NIPH 521, strain 69
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.