Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000753985_01341 | GCA_000753985_03625 | GCA_000753985_01341 | GCA_000753985_03625 | Unannotated protein. | Unannotated protein. | 0.962 |
GCA_000753985_01341 | accA | GCA_000753985_01341 | GCA_000753985_04099 | Unannotated protein. | Unannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. | 0.980 |
GCA_000753985_01341 | accB | GCA_000753985_01341 | GCA_000753985_00690 | Unannotated protein. | Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.979 |
GCA_000753985_01341 | accC | GCA_000753985_01341 | GCA_000753985_00689 | Unannotated protein. | Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.970 |
GCA_000753985_01341 | accD | GCA_000753985_01341 | GCA_000753985_01351 | Unannotated protein. | Unannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.987 |
GCA_000753985_01341 | fabZ | GCA_000753985_01341 | GCA_000753985_01590 | Unannotated protein. | Unannotated protein; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.953 |
GCA_000753985_01827 | GCA_000753985_02816 | GCA_000753985_01827 | GCA_000753985_02816 | Unannotated protein. | Unannotated protein; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.940 |
GCA_000753985_01827 | GCA_000753985_03625 | GCA_000753985_01827 | GCA_000753985_03625 | Unannotated protein. | Unannotated protein. | 0.915 |
GCA_000753985_01827 | NDM229_012610 | GCA_000753985_01827 | GCA_000753985_02935 | Unannotated protein. | Unannotated protein. | 0.903 |
GCA_000753985_01827 | accA | GCA_000753985_01827 | GCA_000753985_04099 | Unannotated protein. | Unannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. | 0.906 |
GCA_000753985_01827 | accB | GCA_000753985_01827 | GCA_000753985_00690 | Unannotated protein. | Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.906 |
GCA_000753985_01827 | accC | GCA_000753985_01827 | GCA_000753985_00689 | Unannotated protein. | Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.925 |
GCA_000753985_01827 | accD | GCA_000753985_01827 | GCA_000753985_01351 | Unannotated protein. | Unannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.912 |
GCA_000753985_01827 | acsA | GCA_000753985_01827 | GCA_000753985_02024 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.922 |
GCA_000753985_02816 | GCA_000753985_01827 | GCA_000753985_02816 | GCA_000753985_01827 | Unannotated protein; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Unannotated protein. | 0.940 |
GCA_000753985_02816 | GCA_000753985_03625 | GCA_000753985_02816 | GCA_000753985_03625 | Unannotated protein; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Unannotated protein. | 0.915 |
GCA_000753985_02816 | NDM229_012610 | GCA_000753985_02816 | GCA_000753985_02935 | Unannotated protein; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Unannotated protein. | 0.940 |
GCA_000753985_02816 | accA | GCA_000753985_02816 | GCA_000753985_04099 | Unannotated protein; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Unannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. | 0.910 |
GCA_000753985_02816 | accB | GCA_000753985_02816 | GCA_000753985_00690 | Unannotated protein; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.935 |
GCA_000753985_02816 | accC | GCA_000753985_02816 | GCA_000753985_00689 | Unannotated protein; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.931 |
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