STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000829655_00248Unannotated protein. (594 aa)    
Predicted Functional Partners:
GCA_000829655_00249
Unannotated protein.
 
  
 0.966
AS4_23110
Unannotated protein.
 
  
 0.858
GCA_000829655_03905
Unannotated protein.
 
  
 0.858
GCA_000829655_00250
Unannotated protein.
   
0.854
AS4_23090
Unannotated protein.
 
  
 0.828
GCA_000829655_03911
Unannotated protein.
 
  
 0.827
GCA_000829655_00251
Unannotated protein.
  
  
 0.750
ddc
Unannotated protein.
 
  
 0.716
AS4_23070
Unannotated protein.
 
     0.526
AS4_23060
Unannotated protein.
 
     0.510
Your Current Organism:
Acinetobacter guillouiae
NCBI taxonomy Id: 106649
Other names: A. guillouiae, ATCC 11171, Acinetobacter genomic species 11, Acinetobacter genomosp. 11, Acinetobacter genomospecies 11, Acinetobacter genosp. 11, Acinetobacter genospecies 11, Acinetobacter guillouiae Nemec et al. 2010, Acinetobacter sp. TDB-2008b, CCUG 2491, CIP 63.46, DSM 590, LMG 988, LMG:988, NIPH 522
Server load: low (22%) [HD]