Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AS4_06980 | AS4_39510 | GCA_000829655_04327 | GCA_000829655_02659 | Unannotated protein. | Unannotated protein. | 0.645 |
AS4_06980 | fadB | GCA_000829655_04327 | GCA_000829655_00350 | Unannotated protein. | Unannotated protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.536 |
AS4_06980 | fadJ | GCA_000829655_04327 | GCA_000829655_01699 | Unannotated protein. | Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.536 |
AS4_07320 | AS4_09530 | GCA_000829655_04363 | GCA_000829655_04565 | Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. | Unannotated protein. | 0.573 |
AS4_07320 | AS4_39510 | GCA_000829655_04363 | GCA_000829655_02659 | Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. | Unannotated protein. | 0.668 |
AS4_07320 | fadA | GCA_000829655_04363 | GCA_000829655_00351 | Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. | Unannotated protein; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. | 0.917 |
AS4_07320 | fadB | GCA_000829655_04363 | GCA_000829655_00350 | Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. | Unannotated protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.994 |
AS4_07320 | fadJ | GCA_000829655_04363 | GCA_000829655_01699 | Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. | Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.993 |
AS4_09530 | AS4_07320 | GCA_000829655_04565 | GCA_000829655_04363 | Unannotated protein. | Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.573 |
AS4_09530 | AS4_39510 | GCA_000829655_04565 | GCA_000829655_02659 | Unannotated protein. | Unannotated protein. | 0.700 |
AS4_09530 | fadA | GCA_000829655_04565 | GCA_000829655_00351 | Unannotated protein. | Unannotated protein; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. | 0.573 |
AS4_09530 | fadB | GCA_000829655_04565 | GCA_000829655_00350 | Unannotated protein. | Unannotated protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.943 |
AS4_09530 | fadJ | GCA_000829655_04565 | GCA_000829655_01699 | Unannotated protein. | Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.927 |
AS4_39500 | AS4_39510 | GCA_000829655_02658 | GCA_000829655_02659 | Unannotated protein. | Unannotated protein. | 0.715 |
AS4_39510 | AS4_06980 | GCA_000829655_02659 | GCA_000829655_04327 | Unannotated protein. | Unannotated protein. | 0.645 |
AS4_39510 | AS4_07320 | GCA_000829655_02659 | GCA_000829655_04363 | Unannotated protein. | Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.668 |
AS4_39510 | AS4_09530 | GCA_000829655_02659 | GCA_000829655_04565 | Unannotated protein. | Unannotated protein. | 0.700 |
AS4_39510 | AS4_39500 | GCA_000829655_02659 | GCA_000829655_02658 | Unannotated protein. | Unannotated protein. | 0.715 |
AS4_39510 | etfA | GCA_000829655_02659 | GCA_000829655_01302 | Unannotated protein. | Unannotated protein. | 0.699 |
AS4_39510 | etfB | GCA_000829655_02659 | GCA_000829655_01303 | Unannotated protein. | Unannotated protein. | 0.650 |
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