STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS4_04070Unannotated protein; Belongs to the GMC oxidoreductase family. (991 aa)    
Predicted Functional Partners:
betI
Unannotated protein; Repressor involved in choline regulation of the bet genes.
 
  
 0.670
AS4_10070
Unannotated protein.
    
 0.598
GCA_000829655_00112
Unannotated protein.
    
 0.422
AS4_37110
Unannotated protein.
    
 0.422
AS4_42700
Unannotated protein.
    
 0.422
AS4_03230
Unannotated protein.
    
 0.422
GCA_000829655_00380
Unannotated protein.
    
 0.410
AS4_43360
Unannotated protein.
    
 0.410
AS4_43160
Unannotated protein.
    
 0.410
AS4_01470
Unannotated protein.
    
 0.410
Your Current Organism:
Acinetobacter guillouiae
NCBI taxonomy Id: 106649
Other names: A. guillouiae, ATCC 11171, Acinetobacter genomic species 11, Acinetobacter genomosp. 11, Acinetobacter genomospecies 11, Acinetobacter genosp. 11, Acinetobacter genospecies 11, Acinetobacter guillouiae Nemec et al. 2010, Acinetobacter sp. TDB-2008b, CCUG 2491, CIP 63.46, DSM 590, LMG 988, LMG:988, NIPH 522
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.