STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsoBUnannotated protein. (333 aa)    
Predicted Functional Partners:
dsoD
Unannotated protein.
 
 
 0.999
dsoC
Unannotated protein.
 
 
 0.998
dsoE
Unannotated protein.
 
 
 0.997
dsoA
Unannotated protein.
 
  
 0.996
dsoF
Unannotated protein.
 
  
 0.989
catA-3
Unannotated protein.
    
  0.925
catA
Unannotated protein.
     
  0.900
catA-2
Unannotated protein.
     
  0.900
benD
Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
  0.900
GCA_000829655_01886
Unannotated protein.
   
 
 0.773
Your Current Organism:
Acinetobacter guillouiae
NCBI taxonomy Id: 106649
Other names: A. guillouiae, ATCC 11171, Acinetobacter genomic species 11, Acinetobacter genomosp. 11, Acinetobacter genomospecies 11, Acinetobacter genosp. 11, Acinetobacter genospecies 11, Acinetobacter guillouiae Nemec et al. 2010, Acinetobacter sp. TDB-2008b, CCUG 2491, CIP 63.46, DSM 590, LMG 988, LMG:988, NIPH 522
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.