STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARG17162.1DUF159 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SOS response-associated peptidase family. (244 aa)    
Predicted Functional Partners:
ARG17163.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
       0.672
ARG17164.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.658
ARG17165.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.658
ARG17166.1
Zn-dependent oligopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.644
ARG17167.1
Heme-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.644
ARG18822.1
Heme-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.618
ARG18729.1
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.483
ARG16877.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.479
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
       0.476
ARG16787.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.403
Your Current Organism:
Acinetobacter nosocomialis
NCBI taxonomy Id: 106654
Other names: A. nosocomialis, Acinetobacter genomosp. 13TU, Acinetobacter genosp. 13TU, Acinetobacter nosocomialis Nemec et al. 2011, Acinetobacter sp. NF108071, Acinetobacter sp. WC-487, CCM 7791, CCUG 74064, LMG 10619, LMG:10619, NIPH 2119, strain RUH 2376
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.