STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARG18855.1Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (339 aa)    
Predicted Functional Partners:
ARG17755.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.987
ARG18856.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.964
ARG17754.1
ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.961
ARG17163.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
  
 0.827
ARG17164.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.807
ARG17753.1
NADH oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.718
ARG17756.1
Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.683
rnhA
DNA polymerase III subunit epsilon; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.621
ARG17758.1
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.591
Your Current Organism:
Acinetobacter nosocomialis
NCBI taxonomy Id: 106654
Other names: A. nosocomialis, Acinetobacter genomosp. 13TU, Acinetobacter genosp. 13TU, Acinetobacter nosocomialis Nemec et al. 2011, Acinetobacter sp. NF108071, Acinetobacter sp. WC-487, CCM 7791, CCUG 74064, LMG 10619, LMG:10619, NIPH 2119, strain RUH 2376
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.