STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARG18529.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (108 aa)    
Predicted Functional Partners:
ARG18527.1
General secretion pathway protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.690
ARG18528.1
General secretion pathway protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.690
ARG18526.1
Type II secretion system protein GspD; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.672
ARG18922.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.668
ARG18525.1
FHA domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.642
ARG18530.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.626
hemC
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
       0.626
ARG18533.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.600
ARG15909.1
Long-chain fatty acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.547
ARG18921.1
Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.487
Your Current Organism:
Acinetobacter nosocomialis
NCBI taxonomy Id: 106654
Other names: A. nosocomialis, Acinetobacter genomosp. 13TU, Acinetobacter genosp. 13TU, Acinetobacter nosocomialis Nemec et al. 2011, Acinetobacter sp. NF108071, Acinetobacter sp. WC-487, CCM 7791, CCUG 74064, LMG 10619, LMG:10619, NIPH 2119, strain RUH 2376
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.