STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFHC1EF-hand domain containing 1. (630 aa)    
Predicted Functional Partners:
WDR90
WD repeat domain 90.
    
 
 0.956
PACRG
Parkin coregulated.
  
 
 0.918
ENSCABP00000004740
annotation not available
  
 
 0.912
TEKT1
Tektin 1.
   
 
 0.904
PACRGL
Parkin coregulated like.
   
 
 0.895
ENKUR
Enkurin, TRPC channel interacting protein.
   
 
 0.895
ENSCABP00000018308
annotation not available
   
   0.892
TEKT2
Tektin 2.
   
 
 0.887
TEKT3
Tektin 3.
   
 
 0.879
CFAP45
Cilia and flagella associated protein 45.
   
 
 0.874
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.