STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCABP00000001147annotation not available (127 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.559
ENSCABP00000010189
annotation not available
  
     0.528
BARD1
BRCA1 associated RING domain 1.
    
  0.502
ENSCABP00000019037
annotation not available
    
  0.492
ENSCABP00000019047
annotation not available
    
  0.492
ENSCABP00000026531
annotation not available
  
     0.491
SUFU
SUFU negative regulator of hedgehog signaling.
    
  0.480
GTF3C3
General transcription factor IIIC subunit 3.
    
 0.466
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
  0.464
ENSCABP00000007223
annotation not available
  
     0.461
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.