STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCABP00000001271annotation not available (899 aa)    
Predicted Functional Partners:
NUDT12
Nudix hydrolase 12.
   
  0.821
DCP2
Decapping mRNA 2.
    
 
 0.686
ENSCABP00000004748
annotation not available
    
 
 0.623
ENSCABP00000004750
annotation not available
    
 
 0.623
ENSCABP00000023330
annotation not available
    
 
 0.623
AK6
Adenylate kinase 6.
   
 
  0.595
CDA
Cytidine deaminase.
   
 
  0.594
ADSL
Adenylosuccinate lyase.
     
 0.591
NAPRT
Nicotinate phosphoribosyltransferase.
     
 0.582
ENSCABP00000025309
annotation not available
   
 0.565
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.