STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGALS1Galectin 1. (135 aa)    
Predicted Functional Partners:
LGALS2
Galectin 2.
  
  
0.825
ANXA2
Annexin A2.
   
 
 0.564
ANXA1
Annexin A1.
   
 
 0.534
PTPRC
Protein tyrosine phosphatase receptor type C.
    
 
 0.520
S100A11
S100 calcium binding protein A11.
   
  0.485
S100A10
S100 calcium binding protein A10.
   
 0.438
ENSCABP00000014454
annotation not available
    
  0.421
ENSCABP00000014457
annotation not available
    
  0.421
ENSCABP00000004903
annotation not available
   
 0.411
LGALS3
Galectin 3.
   
0.411
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.