STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCABP00000001408annotation not available (166 aa)    
Predicted Functional Partners:
ENSCABP00000023352
annotation not available
   
 0.956
CDYL2
Chromodomain Y like 2.
   
 0.956
CBX3
Chromobox 3.
   
 0.939
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
    
 0.930
EED
Embryonic ectoderm development.
    
 0.906
ENSCABP00000031415
annotation not available
    
 0.895
DDB1
Damage specific DNA binding protein 1.
    
 0.892
CBX1
Chromobox 1.
   
 0.876
CBX5
Chromobox 5.
   
 0.876
ENSCABP00000013152
annotation not available
   
 0.866
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.