STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCABP00000001437annotation not available (70 aa)    
Predicted Functional Partners:
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.999
RPL13A
Ribosomal protein L13a.
  
 0.992
ENSCABP00000001838
annotation not available
  
 0.992
RPL31
Ribosomal protein L31.
   
 0.992
RPL9
Ribosomal protein L9.
  
 0.992
RPL29
Ribosomal protein L29.
   
 0.992
RPL30
Ribosomal protein L30.
   
 0.992
RPL4
Ribosomal protein L4.
  
 0.992
RPL6
Ribosomal protein L6.
  
 0.992
ENSCABP00000023735
annotation not available
   
 0.992
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.