STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YTHDF1YTH N6-methyladenosine RNA binding protein 1. (558 aa)    
Predicted Functional Partners:
ENSCABP00000016835
annotation not available
    
 0.757
ENSCABP00000016838
annotation not available
    
 0.757
CNOT9
CCR4-NOT transcription complex subunit 9.
    
  0.720
METTL14
Methyltransferase like 14.
  
   
 0.701
ENSCABP00000018670
annotation not available
   
 0.689
RBM26
RNA binding motif protein 26.
   
 0.683
UBE2Z
Ubiquitin conjugating enzyme E2 Z.
   
    0.670
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 
 0.638
ENSCABP00000016942
annotation not available
    
 0.627
WTAP
WT1 associated protein.
   
  
 0.627
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.