STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCABP00000001546annotation not available (149 aa)    
Predicted Functional Partners:
ADSL
Adenylosuccinate lyase.
   
 0.885
APRT
Adenine phosphoribosyltransferase.
  
 
 0.868
ATP5F1C
ATP synthase F1 subunit gamma.
   
 
 0.856
ENSCABP00000004123
annotation not available
  
 
 0.854
ENSCABP00000004138
annotation not available
  
 
 0.854
ATP5F1A
ATP synthase F1 subunit alpha.
  
 
 0.840
ENSCABP00000019037
annotation not available
    
 0.837
AK2
Adenylate kinase 2.
    
 0.836
EPHX2
Epoxide hydrolase 2.
   
  0.826
AMPD1
Adenosine monophosphate deaminase 1.
   
 
 0.824
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.