STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REXO5RNA exonuclease 5. (746 aa)    
Predicted Functional Partners:
PAN3
poly(A) specific ribonuclease subunit PAN3.
    
 0.922
REXO2
RNA exonuclease 2.
  
 0.913
PCNA
Proliferating cell nuclear antigen.
  
 0.884
REXO1
RNA exonuclease 1 homolog.
     
0.821
ENSCABP00000018964
annotation not available
     
0.821
TBL2
Transducin beta like 2.
   
  0.796
GMPS
Guanine monophosphate synthase.
  
 
 0.756
FBH1
F-box DNA helicase 1.
  
 
 0.752
EXOSC10
Exosome component 10.
  
 0.719
DIS3
DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease.
   
 0.689
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.