STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCABP00000001992annotation not available (403 aa)    
Predicted Functional Partners:
RANGAP1
Ran GTPase activating protein 1.
   
 0.974
NUP93
Nucleoporin 93.
   
 0.961
NUP54
Nucleoporin 54.
   
 0.955
NUP155
Nucleoporin 155.
   
 0.955
NUP85
Nucleoporin 85.
   
 0.946
NUP133
Nucleoporin 133.
   
 0.943
NUP107
Nucleoporin 107.
   
 0.943
NUP153
Nucleoporin 153.
   
 0.935
NUP214
Nucleoporin 214.
   
 0.921
NUP205
Nucleoporin 205.
   
 0.914
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.