STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCABP00000002185annotation not available (169 aa)    
Predicted Functional Partners:
C1QC
Complement C1q C chain.
    
  0.559
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.513
RPTOR
Regulatory associated protein of MTOR complex 1.
    
 0.485
SETDB1
SET domain bifurcated histone lysine methyltransferase 1.
    
  0.476
SETDB2
SET domain bifurcated histone lysine methyltransferase 2.
    
  0.476
TAF9
TATA-box binding protein associated factor 9.
    
  0.471
TAF12
TATA-box binding protein associated factor 12.
    
  0.471
SUPT3H
SPT3 homolog, SAGA and STAGA complex component.
    
  0.466
MLST8
MTOR associated protein, LST8 homolog.
    
  0.463
ENSCABP00000002564
annotation not available
    
  0.462
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.