STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TANC2Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2. (2057 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.819
PPP6C
Protein phosphatase 6 catalytic subunit.
   
 0.712
CHKA
Choline kinase alpha.
     
 0.644
IFT81
Intraflagellar transport 81.
    
 0.614
PPP6R1
Protein phosphatase 6 regulatory subunit 1.
    
 0.595
PPP6R2
Protein phosphatase 6 regulatory subunit 2.
    
 0.595
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.595
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
    
 0.595
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.595
IFT80
Intraflagellar transport 80.
    
 0.593
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.