STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSR1Signal sequence receptor subunit 1. (223 aa)    
Predicted Functional Partners:
SSR3
Signal sequence receptor subunit 3.
   
 0.997
SSR2
Signal sequence receptor subunit 2.
   
 0.996
SSR4
Signal sequence receptor subunit 4.
   
 0.994
RPN1
Ribophorin I.
   
 0.955
RPN2
Ribophorin II.
   
 0.948
DDOST
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit.
   
 0.937
ENSCABP00000009321
annotation not available
   
 0.908
SEC61B
SEC61 translocon beta subunit.
   
 0.908
STT3A
STT3 oligosaccharyltransferase complex catalytic subunit A.
   
 
 0.883
OSTC
Oligosaccharyltransferase complex non-catalytic subunit.
   
 
 0.846
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.