STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNGA4Cyclic nucleotide gated channel subunit alpha 4. (636 aa)    
Predicted Functional Partners:
ENSCABP00000028822
annotation not available
  
0.965
CNGB3
Cyclic nucleotide gated channel subunit beta 3.
  
0.965
CNGA2
Cyclic nucleotide gated channel subunit alpha 2.
  
  
0.937
CALML6
Calmodulin like 6.
     
 0.868
CNGA1
Cyclic nucleotide gated channel subunit alpha 1.
  
  
0.868
CNGA3
Cyclic nucleotide gated channel subunit alpha 3.
  
  
0.863
CALML4
Calmodulin like 4.
     
 0.823
ENSCABP00000017551
annotation not available
     
 0.700
GUCA1B
Guanylate cyclase activator 1B.
   
 
 0.645
ENSCABP00000000528
annotation not available
     
 0.598
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.