STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCABP00000003075annotation not available (132 aa)    
Predicted Functional Partners:
ARMC8
Armadillo repeat containing 8.
    
 0.940
WDR26
WD repeat domain 26.
    
 0.918
RMND5A
Required for meiotic nuclear division 5 homolog A.
    
 0.855
RMND5B
Required for meiotic nuclear division 5 homolog B.
    
 0.855
YIF1A
Yip1 interacting factor homolog A, membrane trafficking protein.
   
 
 0.802
YIF1B
Yip1 interacting factor homolog B, membrane trafficking protein.
   
 
 0.802
COPE
Coatomer protein complex subunit epsilon.
   
  
 0.796
EIF3F
Eukaryotic translation initiation factor 3 subunit F.
    
  0.715
EIF3G
Eukaryotic translation initiation factor 3 subunit G.
   
 
  0.708
EIF3I
Eukaryotic translation initiation factor 3 subunit I.
   
 
  0.697
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.