STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCABP00000003205annotation not available (68 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
    
 
 0.957
GRB2
Growth factor receptor bound protein 2.
    
 0.929
NCK2
NCK adaptor protein 2.
    
 
 0.721
SH3RF3
SH3 domain containing ring finger 3.
    
 
 0.671
ENSCABP00000028677
annotation not available
    
 0.656
GRAP2
GRB2 related adaptor protein 2.
    
 0.656
CLTC
Clathrin heavy chain.
    
 
 0.626
CLTCL1
Clathrin heavy chain like 1.
    
 
 0.626
SNX9
Sorting nexin 9.
    
 
 0.553
SNX18
Sorting nexin 18.
    
 
 0.553
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.