STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCABP00000003232annotation not available (279 aa)    
Predicted Functional Partners:
ENSCABP00000000612
annotation not available
   
 0.748
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
    
  0.745
MRPS5
Mitochondrial ribosomal protein S5.
   
 0.676
BYSL
Bystin like.
   
 0.670
RPS2
Ribosomal protein S2.
    
 0.667
SIGMAR1
Sigma non-opioid intracellular receptor 1.
   
 0.660
RPS24
Ribosomal protein S24.
   
  0.655
RPS8
Ribosomal protein S8.
    
  0.643
RPS7
Ribosomal protein S7.
    
  0.642
RPS3A
Ribosomal protein S3A.
    
  0.642
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.