STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCABP00000003364annotation not available (315 aa)    
Predicted Functional Partners:
ENSCABP00000003367
annotation not available
 
     0.914
RAB27B
RAB27B, member RAS oncogene family.
    
 
 0.821
RAB27A
RAB27A, member RAS oncogene family.
    
 
 0.821
ENSCABP00000014755
annotation not available
    
 0.718
MYO5A
Myosin VA.
    
 0.718
MYO5C
Myosin VC.
    
 0.718
ENSCABP00000003140
annotation not available
    
 0.683
RILPL2
Rab interacting lysosomal protein like 2.
    
 
 0.653
RADIL
Rap associating with DIL domain.
    
 0.474
ENSCABP00000008474
annotation not available
    
 0.474
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.