STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC26A9Solute carrier family 26 member 9. (760 aa)    
Predicted Functional Partners:
ENSCABP00000024340
annotation not available
    
 0.837
MRE11
MRE11 homolog, double strand break repair nuclease.
  
  0.811
RAB7A
RAB7A, member RAS oncogene family.
    
  0.765
GATB
glutamyl-tRNA amidotransferase subunit B.
    
  0.703
LGR4
Leucine rich repeat containing G protein-coupled receptor 4.
     
 0.690
RXFP1
Relaxin family peptide receptor 1.
     
 0.690
ENSCABP00000007825
annotation not available
     
 0.690
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
     
 0.690
CFTR
CF transmembrane conductance regulator.
    
 
 0.636
ENSCABP00000000663
annotation not available
    
 0.625
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.