STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF521Zinc finger protein 521. (1228 aa)    
Predicted Functional Partners:
ENSCABP00000020701
annotation not available
 
 
   0.945
ENSCABP00000003686
annotation not available
 
     0.920
HDAC3
Histone deacetylase 3.
    
  0.694
ZNF536
Zinc finger protein 536.
    
 
0.637
ENSCABP00000027426
annotation not available
    
 
0.637
ENSCABP00000003150
annotation not available
    
  0.618
MBD2
methyl-CpG binding domain protein 2.
    
  0.618
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
  0.583
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
  0.583
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.560
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.