STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S100A13S100 calcium binding protein A13. (96 aa)    
Predicted Functional Partners:
FGF1
Fibroblast growth factor 1.
    
 
 0.972
IL1B
Interleukin 1 beta.
    
 
 0.891
SYT1
Synaptotagmin 1.
    
 
 0.885
SYT2
Synaptotagmin 2.
    
 
 0.885
SYT5
Synaptotagmin 5.
    
 
 0.816
FGF9
Fibroblast growth factor 9.
    
 
 0.679
FGF20
Fibroblast growth factor 20.
    
 
 0.679
FGF16
Fibroblast growth factor 16.
    
 
 0.679
FGF11
Fibroblast growth factor 11.
    
 
 0.613
S100A16
S100 calcium binding protein A16.
  
   
 0.486
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.