STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROMO1Reactive oxygen species modulator 1. (79 aa)    
Predicted Functional Partners:
ENSCABP00000022124
annotation not available
    
 0.983
PAM16
Presequence translocase associated motor 16.
   
 
 0.963
TIMM21
Translocase of inner mitochondrial membrane 21.
    
 0.962
TIMM50
Translocase of inner mitochondrial membrane 50.
   
 
 0.949
TIMM17B
Translocase of inner mitochondrial membrane 17B.
   
 0.946
TIMM44
Translocase of inner mitochondrial membrane 44.
   
 
 0.944
TIMM17A
Translocase of inner mitochondrial membrane 17A.
   
 0.943
GRPEL1
GrpE like 1, mitochondrial.
   
 
 0.921
PIKFYVE
Phosphoinositide kinase, FYVE-type zinc finger containing.
     
 0.916
DNAJC15
DnaJ heat shock protein family (Hsp40) member C15.
   
 0.912
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.