STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCABP00000003933annotation not available (745 aa)    
Predicted Functional Partners:
TRNAU1AP
tRNA selenocysteine 1 associated protein 1.
   
 0.989
SF3B1
Splicing factor 3b subunit 1.
   
 0.988
RBM25
RNA binding motif protein 25.
   
 0.985
SNRPC
Small nuclear ribonucleoprotein polypeptide C.
   
 0.983
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
    
 0.981
SNRPD1
Small nuclear ribonucleoprotein D1 polypeptide.
    
 0.978
PRPF40B
pre-mRNA processing factor 40 homolog B.
    
 0.976
SNRPB
Small nuclear ribonucleoprotein polypeptides B and B1.
    
 0.972
SNRNP70
Small nuclear ribonucleoprotein U1 subunit 70.
    
 0.971
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
   
 0.967
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.