STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FASTKD3FAST kinase domains 3. (655 aa)    
Predicted Functional Partners:
ENSCABP00000001489
annotation not available
    
 0.671
FASTKD2
FAST kinase domains 2.
   
 
0.650
SARDH
Sarcosine dehydrogenase.
  
 0.649
DMGDH
Dimethylglycine dehydrogenase.
  
 0.649
ENSCABP00000016034
annotation not available
  
 0.649
PDPR
Pyruvate dehydrogenase phosphatase regulatory subunit.
  
 0.649
AMT
Aminomethyltransferase.
  
 0.649
MRPS31
Mitochondrial ribosomal protein S31.
    
 
 0.625
ENSCABP00000004142
annotation not available
  
  
 0.616
DHX30
DExH-box helicase 30.
    
 
 0.614
Your Current Organism:
Chelonoidis abingdonii
NCBI taxonomy Id: 106734
Other names: Abingdon island giant tortoise, C. abingdonii, Chelonoidis nigra abingdonii, Geochelone nigra abigdonii, Geochelone nigra abingdoni, Geochelone nigra ephippium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.